Ab Initio Molecular Dynamics Thesis

Content from this work may be used under the terms of the Creative Commons Attribution 3.0 licence.Any further distribution of this work must maintain attribution to the author(s) and the title of the work, journal citation and DOI.I calculate coherence dynamics and a trajectory of 2D spectra and demonstrate that electronic coherence persists for just 100-150 femtoseconds, after which long-lived vibrationally driven coherences persist for hundreds of femtoseconds.

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We describe the foundations of the method and present in some detail the practical performance of an ab-initio molecular dynamics simulation.

accuracy, and prediction of a new mechanism for defect generation and new defective states that are different from classical molecular dynamics (MD) simulations.

CO adsorption is modeled using a 4 × 4 cell, while a 2 × 2 cell is used both for methoxy and H adsorption.

In the case of H, the most favorable adsorption is obtained by considering two atoms per cell, both at three-fold sites.

In 2007, Engel’s proposal of long-lived coherence in photosynthesis precipitated substantial efforts to understand the role of quantum effects in biology.

While much progress has been made in the last decade, the timescale, type, and functional importance of coherence coupled to thermal vibrations remains poorly understood.

" We performed, for the first time to our knowledge, fully ab initio molecular dynamics simulations of additive tribochemistry in boundary lubrication conditions.

We consider an organophosphourus additive that has been experimentally shown to reduce friction in steel-on-steel sliding contacts thanks to the tribologically-induced formation of an iron phosphide tribofilm.

In the present work, this method is employed to study the low energy recoil events in Gd disordering.

The average charge transfer from the primary knock-on atom to its neighbors is estimated to be ∼0.15, ∼0.11 to 0.27 and ∼0.1 to 0.13 |e| for Gd, Zr (or Ti), and O, respectively.


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